Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility protein gldc | N180_13410 | Not Available | Negative | 2900465 - 2900800 | 13070.6 |
| dead/deah box helicase | N180_13420 | Not Available | Negative | 2901072 - 2902409 | 50097.1 |
| dihydroorotase | N180_13425 | Not Available | Positive | 2902469 - 2903803 | 49187.0 |
| hypothetical protein | N180_13430 | Not Available | Positive | 2903803 - 2904939 | 43034.2 |
| heat shock protein hsp70 | N180_13435 | Not Available | Positive | 2904963 - 2906861 | 68737.3 |
| s1/p1 nuclease | N180_13440 | Not Available | Positive | 2907034 - 2907777 | 28694.1 |
| membrane protein | N180_13445 | Not Available | Negative | 2907783 - 2908439 | 24515.6 |
| dna polymerase iii subunit beta | N180_13450 | Not Available | Negative | 2908516 - 2909640 | 41337.5 |
| hypothetical protein | N180_13455 | Not Available | Positive | 2909807 - 2910424 | 23471.3 |
| glycerophosphodiester phosphodiesterase | N180_13460 | Not Available | Positive | 2910487 - 2911470 | 36256.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

