Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fes assembly protein iscx | N180_13360 | Not Available | Negative | 2892145 - 2892387 | 9817.28 |
| ferredoxin | N180_13365 | Not Available | Negative | 2892423 - 2892755 | 12153.5 |
| oxidoreductase | N180_13370 | Not Available | Negative | 2892794 - 2893558 | 27302.9 |
| cytochrome c biogenesis protein | N180_13375 | Not Available | Negative | 2893639 - 2896110 | 92609.4 |
| cytochrome c biogenesis protein | N180_13380 | Not Available | Negative | 2896116 - 2896526 | 15583.7 |
| glutamate dehydrogenase | N180_13385 | Not Available | Negative | 2896720 - 2898141 | 51701.0 |
| hypothetical protein | N180_13390 | Not Available | Negative | 2898296 - 2898511 | 7828.94 |
| abc transporter permease | N180_13395 | Not Available | Negative | 2898563 - 2899222 | 24802.7 |
| abc transporter permease | N180_13400 | Not Available | Negative | 2899396 - 2900055 | 24373.0 |
| hypothetical protein | N180_13405 | Not Available | Negative | 2900042 - 2900464 | 15567.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

