Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol phosphate aminotransferase | N180_13255 | Not Available | Positive | 2874962 - 2876008 | 38767.6 |
| imidazoleglycerol-phosphate dehydratase | N180_13260 | Not Available | Positive | 2876010 - 2877143 | 42350.4 |
| imidazole glycerol phosphate synthase | N180_13265 | Not Available | Positive | 2877145 - 2877738 | 21738.3 |
| phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase | N180_13270 | Not Available | Positive | 2877740 - 2878489 | 28012.0 |
| phosphoribosyl-atp pyrophosphatase | N180_13280 | Not Available | Positive | 2879246 - 2879836 | 22192.5 |
| hypothetical protein | N180_13285 | Not Available | Positive | 2879839 - 2880738 | 34053.6 |
| hydrolase | N180_13290 | Not Available | Negative | 2880735 - 2881517 | 29486.6 |
| universal stress protein | N180_13295 | Not Available | Positive | 2881646 - 2882095 | 16180.3 |
| molecular chaperone dnaj | N180_13300 | Not Available | Negative | 2882167 - 2883336 | 41650.3 |
| molecular chaperone grpe | N180_13305 | Not Available | Negative | 2883339 - 2883926 | 21917.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

