Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | N180_04215 | Not Available | Negative | 2856115 - 2857188 | 40561.3 |
| udp-2,3-diacylglucosamine hydrolase | N180_04220 | Not Available | Negative | 2857322 - 2858116 | 31268.5 |
| ferredoxin-nadp reductase | N180_04225 | Not Available | Positive | 2858316 - 2859326 | 36791.4 |
| ferredoxin | N180_04230 | Not Available | Positive | 2859330 - 2859656 | 11751.2 |
| hypothetical protein | N180_04235 | Not Available | Negative | 2859740 - 2859955 | 8314.1 |
| Trna-leu | Not Available | Not Available | Positive | 2860198 - 2860280 | Not Available |
| membrane protein | N180_13180 | Not Available | Negative | 2860356 - 2860661 | 11409.5 |
| molecular chaperone hsc20 | N180_13185 | Not Available | Negative | 2860741 - 2861274 | 20622.5 |
| peptidase | N180_13190 | Not Available | Negative | 2861279 - 2862610 | 48407.2 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | N180_13195 | Not Available | Negative | 2862640 - 2863806 | 42819.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

