Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium transporter ktrb | N180_04150 | Not Available | Negative | 2840860 - 2842890 | 71642.9 |
| potassium abc transporter atpase | N180_04155 | Not Available | Negative | 2842901 - 2844619 | 62458.0 |
| hypothetical protein | N180_04160 | Not Available | Negative | 2844629 - 2844949 | 12624.9 |
| chemotaxis protein chey | N180_04165 | Not Available | Negative | 2844965 - 2846299 | 50245.0 |
| hypothetical protein | N180_04180 | Not Available | Negative | 2848104 - 2850659 | 92275.7 |
| hypothetical protein | N180_04185 | Not Available | Positive | 2850857 - 2851921 | 40835.0 |
| chemotaxis protein chey | N180_04190 | Not Available | Positive | 2851918 - 2852670 | 28502.6 |
| Trna-asp | Not Available | Not Available | Positive | 2852761 - 2852834 | Not Available |
| alpha-l-fucosidase | N180_04205 | Not Available | Positive | 2854135 - 2855781 | 61946.0 |
| Trna-asp | Not Available | Not Available | Positive | 2855950 - 2856026 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

