Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sui1 family translation initiation factor | N180_04045 | Not Available | Negative | 2818875 - 2819228 | 12734.5 |
| diacylglycerol kinase | N180_04050 | Not Available | Negative | 2819242 - 2820138 | 32923.1 |
| s-adenosylmethionine synthase | N180_04055 | Not Available | Positive | 2820373 - 2821641 | 46437.1 |
| hypothetical protein | N180_04060 | Not Available | Positive | 2821791 - 2822138 | 13170.6 |
| tonb-dependent receptor | N180_04065 | Not Available | Positive | 2822757 - 2825246 | 92446.2 |
| membrane protein | N180_04070 | Not Available | Positive | 2825277 - 2825972 | 25692.1 |
| hypothetical protein | N180_04075 | Not Available | Negative | 2826020 - 2826361 | 12232.6 |
| hypothetical protein | N180_04080 | Not Available | Negative | 2826369 - 2826650 | 9729.42 |
| arsr family transcriptional regulator | N180_04085 | Not Available | Positive | 2826859 - 2827188 | 11894.6 |
| hypothetical protein | N180_04090 | Not Available | Positive | 2827230 - 2827661 | 15449.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

