Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-ketoacyl-acp reductase | N180_03835 | Not Available | Negative | 2777409 - 2778125 | 25479.6 |
| hypothetical protein | N180_03840 | Not Available | Negative | 2778275 - 2781547 | 120207.0 |
| 3',5'-cyclic-nucleotide phosphodiesterase | N180_03845 | Not Available | Negative | 2781604 - 2782566 | 35657.0 |
| gtp-binding protein typa | N180_03850 | Not Available | Negative | 2782720 - 2784525 | 67364.5 |
| hypothetical protein | N180_03855 | Not Available | Positive | 2784760 - 2785422 | 24986.6 |
| esterase | N180_03860 | Not Available | Negative | 2785433 - 2786245 | 30315.1 |
| esterase | N180_03865 | Not Available | Positive | 2786393 - 2787106 | 27514.4 |
| glutathione synthase | N180_03870 | Not Available | Positive | 2787166 - 2788188 | 38823.1 |
| carboxylate--amine ligase | N180_03875 | Not Available | Positive | 2788224 - 2789327 | 42153.4 |
| hypothetical protein | N180_03885 | Not Available | Positive | 2790157 - 2791356 | 45996.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

