Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-mannosidase | N180_03580 | Not Available | Negative | 2720830 - 2723106 | 85796.7 |
| glycan metabolism protein ragb | N180_03585 | Not Available | Negative | 2723100 - 2724905 | 67251.0 |
| membrane protein | N180_03590 | Not Available | Negative | 2724917 - 2728297 | 124614.0 |
| hypothetical protein | N180_03595 | Not Available | Negative | 2728556 - 2729788 | 45944.1 |
| hypothetical protein | N180_03600 | Not Available | Negative | 2729873 - 2730472 | 23307.1 |
| hpp family protein | N180_03605 | Not Available | Positive | 2730621 - 2731214 | 22059.4 |
| hypothetical protein | N180_03610 | Not Available | Negative | 2731217 - 2731837 | 23738.2 |
| rna polymerase sigma70 factor | N180_03615 | Not Available | Negative | 2731827 - 2732330 | 19959.8 |
| hypothetical protein | N180_03620 | Not Available | Negative | 2732334 - 2733230 | 33393.7 |
| peroxiredoxin | N180_03625 | Not Available | Positive | 2733428 - 2733841 | 14807.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

