Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna methyltransferase | N180_15615 | Not Available | Negative | 233918 - 234457 | 20064.2 |
| galactokinase | N180_15620 | Not Available | Negative | 234473 - 235624 | 42223.6 |
| aldose epimerase | N180_15625 | Not Available | Positive | 235779 - 236804 | 37750.3 |
| dsba oxidoreductase | N180_15630 | Not Available | Positive | 236929 - 237579 | 23719.8 |
| phosphatidic acid phosphatase | N180_15635 | Not Available | Positive | 237606 - 238208 | 21852.5 |
| hypothetical protein | N180_15640 | Not Available | Positive | 238262 - 240124 | 69095.2 |
| pirin | N180_15645 | Not Available | Positive | 240198 - 240914 | 26798.4 |
| hypothetical protein | N180_15650 | Not Available | Positive | 240916 - 241224 | 11136.6 |
| signal peptidase | N180_15125 | Not Available | Negative | 241258 - 242454 | 45762.8 |
| dihydrodipicolinate reductase | N180_15130 | Not Available | Negative | 242464 - 243204 | 27327.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

