Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tspo and mbr | N180_17295 | Not Available | Negative | 2650813 - 2651307 | 18620.5 |
| thioesterase | N180_17300 | Not Available | Positive | 2651420 - 2651986 | 21059.1 |
| fad-dependent oxidoreductase | N180_17305 | Not Available | Positive | 2652003 - 2653586 | 58651.6 |
| glycerol kinase | N180_17310 | Not Available | Positive | 2653596 - 2655104 | 55012.7 |
| mip (major intrinsic protein) family permease | N180_17315 | Not Available | Positive | 2655152 - 2655877 | 25152.1 |
| hypothetical protein | N180_17320 | Not Available | Positive | 2655903 - 2656121 | 8276.97 |
| alkyl hydroperoxide reductase | N180_17325 | Not Available | Positive | 2656186 - 2657178 | 36881.3 |
| hypothetical protein | N180_17330 | Not Available | Positive | 2657538 - 2660579 | 110520.0 |
| hypothetical protein | N180_17335 | Not Available | Positive | 2660595 - 2661941 | 49036.0 |
| hypothetical protein | N180_17345 | Not Available | Negative | 2664785 - 2665654 | 33347.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

