Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein muts | N180_18895 | Not Available | Positive | 2637683 - 2640058 | 90320.8 |
| glucose dehydrogenase | N180_18900 | Not Available | Positive | 2640111 - 2641208 | 40310.1 |
| succinyl-coa:3-ketoacid-coa transferase | N180_18905 | Not Available | Positive | 2641269 - 2641988 | 26094.3 |
| succinyl-coa:3-ketoacid-coa transferase | N180_18910 | Not Available | Positive | 2641978 - 2642637 | 23455.9 |
| uridine kinase | N180_18915 | Not Available | Negative | 2642634 - 2643281 | 24813.7 |
| peptidoglycan-binding protein | N180_18920 | Not Available | Negative | 2643268 - 2644470 | 44700.4 |
| ferritin | N180_18925 | Not Available | Positive | 2644649 - 2645128 | 18441.1 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | N180_18930 | Not Available | Positive | 2645273 - 2647084 | 66845.3 |
| hypothetical protein | N180_17285 | Not Available | Negative | 2647928 - 2648458 | 20034.9 |
| patatin | N180_17290 | Not Available | Negative | 2648471 - 2650780 | 87221.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

