Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_18840 | Not Available | Negative | 2629463 - 2629672 | 7279.51 |
| rna polymerase subunit sigma-70 | N180_18845 | Not Available | Positive | 2629811 - 2630386 | 21976.3 |
| peroxidase | N180_18855 | Not Available | Positive | 2631659 - 2632294 | 23592.0 |
| cold-shock protein | N180_18860 | Not Available | Positive | 2632417 - 2632614 | 7334.72 |
| hypothetical protein | N180_18865 | Not Available | Negative | 2632679 - 2633860 | 44296.4 |
| aspartate kinase | N180_18870 | Not Available | Negative | 2633853 - 2635127 | 47507.6 |
| hypothetical protein | N180_18875 | Not Available | Negative | 2635127 - 2635954 | 30575.3 |
| gnat family acetyltransferase | N180_18880 | Not Available | Negative | 2635944 - 2636411 | 18213.6 |
| alanine racemase | N180_18885 | Not Available | Negative | 2636411 - 2637097 | 25714.3 |
| hypothetical protein | N180_18890 | Not Available | Positive | 2637252 - 2637686 | 16691.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

