Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase | N180_19500 | Not Available | Negative | 2618514 - 2619503 | 36845.4 |
| 2-amino-3-ketobutyrate coa ligase | N180_19505 | Not Available | Negative | 2619572 - 2620777 | 44053.1 |
| hypothetical protein | N180_19510 | Not Available | Negative | 2621061 - 2621666 | 23227.6 |
| hypothetical protein | N180_19515 | Not Available | Negative | 2621800 - 2623077 | 47887.2 |
| hypothetical protein | N180_19520 | Not Available | Negative | 2623124 - 2623687 | 22191.6 |
| hypothetical protein | N180_19525 | Not Available | Positive | 2623916 - 2624623 | 25922.1 |
| hypothetical protein | N180_19530 | Not Available | Negative | 2624674 - 2624883 | 7525.85 |
| tat pathway signal protein | N180_19535 | Not Available | Negative | 2624970 - 2626385 | 53936.7 |
| thioredoxin | N180_18830 | Not Available | Negative | 2627380 - 2627931 | 20202.0 |
| adenylosuccinate lyase | N180_18835 | Not Available | Negative | 2628019 - 2629365 | 50556.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

