Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deaminase | N180_19655 | Not Available | Negative | 2598459 - 2599022 | 20905.0 |
| hypothetical protein | N180_19660 | Not Available | Positive | 2599176 - 2600603 | 53497.9 |
| histidine kinase | N180_19665 | Not Available | Positive | 2600687 - 2603224 | 95430.9 |
| chemotaxis protein chey | N180_19670 | Not Available | Negative | 2603226 - 2604554 | 49608.1 |
| hypothetical protein | N180_19675 | Not Available | Negative | 2604643 - 2604954 | 11171.4 |
| rrf2 family transcriptional regulator | N180_19680 | Not Available | Positive | 2605286 - 2605723 | 16129.7 |
| uroporphyrin-iii methyltransferase | N180_19685 | Not Available | Positive | 2605813 - 2606604 | 28515.3 |
| peptidase s8 | N180_19690 | Not Available | Positive | 2606811 - 2608415 | 58575.9 |
| hypothetical protein | N180_19695 | Not Available | Positive | 2608556 - 2609323 | 29328.3 |
| cytochrome c oxidase subunit ii | N180_19440 | Not Available | Negative | 2609336 - 2609722 | 14493.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

