Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor faimly transcriptional regulator | N180_06220 | Not Available | Positive | 2524805 - 2525554 | 27572.2 |
| hypothetical protein | N180_06225 | Not Available | Positive | 2525584 - 2526042 | 17694.3 |
| hypothetical protein | N180_16885 | Not Available | Negative | 2526134 - 2526760 | 23529.3 |
| lon protease | N180_16890 | Not Available | Positive | 2527035 - 2529506 | 92256.2 |
| hypothetical protein | N180_16895 | Not Available | Positive | 2529562 - 2530515 | 35378.8 |
| peptide chain release factor 1 | N180_16900 | Not Available | Negative | 2530518 - 2530931 | 15640.0 |
| cytidylate kinase | N180_16905 | Not Available | Positive | 2530959 - 2531657 | 26170.2 |
| membrane protein | N180_16915 | Not Available | Negative | 2533221 - 2536271 | 111554.0 |
| hypothetical protein | N180_16920 | Not Available | Positive | 2536334 - 2537224 | 33786.8 |
| hypothetical protein | N180_16930 | Not Available | Negative | 2539408 - 2539803 | 14719.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

