Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase | N180_06000 | Not Available | Positive | 2482337 - 2482948 | 22320.2 |
| transcriptional regulator | N180_06005 | Not Available | Negative | 2483021 - 2483953 | 35174.3 |
| gdp-l-fucose synthase | N180_06010 | Not Available | Negative | 2484033 - 2484962 | 34662.6 |
| trna (guanine-n7)-methyltransferase | N180_06015 | Not Available | Positive | 2485083 - 2485733 | 25329.3 |
| cysteine methyltransferase | N180_06020 | Not Available | Positive | 2485733 - 2486059 | 12124.6 |
| alkylhydroperoxidase | N180_06025 | Not Available | Positive | 2486069 - 2486410 | 12956.5 |
| dna-3-methyladenine glycosylase | N180_06030 | Not Available | Positive | 2486415 - 2486987 | 21925.1 |
| hypothetical protein | N180_06035 | Not Available | Positive | 2486980 - 2487666 | 25849.6 |
| hypothetical protein | N180_06055 | Not Available | Negative | 2491359 - 2491664 | 10918.0 |
| oxidoreductase | N180_06060 | Not Available | Negative | 2491766 - 2492839 | 39283.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

