Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl-trna synthetase | N180_05945 | Not Available | Negative | 2470815 - 2472560 | 66192.3 |
| rna polymerase subunit sigma-24 | N180_05950 | Not Available | Positive | 2472706 - 2473263 | 21689.2 |
| hypothetical protein | N180_05955 | Not Available | Positive | 2473253 - 2473786 | 20340.6 |
| hypothetical protein | N180_05960 | Not Available | Positive | 2473819 - 2475096 | 46835.4 |
| membrane protein | N180_05965 | Not Available | Positive | 2475178 - 2475960 | 28880.4 |
| hypothetical protein | N180_05970 | Not Available | Positive | 2476050 - 2477105 | 41021.0 |
| histidinol phosphatase | N180_05975 | Not Available | Negative | 2477206 - 2477952 | 28539.5 |
| hypothetical protein | N180_05980 | Not Available | Negative | 2478186 - 2479982 | 69709.5 |
| pp_02066 | N180_05990 | Not Available | Positive | 2481444 - 2481779 | Not Available |
| cmp deaminase | N180_05995 | Not Available | Positive | 2481781 - 2482254 | 17340.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

