Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | N180_05875 | Not Available | Positive | 2455975 - 2459574 | 134065.0 |
| histidine kinase | N180_05880 | Not Available | Positive | 2459598 - 2459969 | 13396.6 |
| chemotaxis protein cher | N180_05885 | Not Available | Positive | 2459969 - 2460796 | 32058.6 |
| response regulator receiver protein | N180_05895 | Not Available | Positive | 2461372 - 2461740 | 13643.1 |
| n-acetylmuramoyl-l-alanine amidase | N180_05910 | Not Available | Positive | 2463658 - 2464491 | 30813.2 |
| glutamate--trna ligase | N180_05915 | Not Available | Negative | 2465114 - 2466799 | 64920.6 |
| enoyl-coa hydratase | N180_05920 | Not Available | Positive | 2466946 - 2467728 | 27462.1 |
| chemotaxis protein chey | N180_05925 | Not Available | Positive | 2467895 - 2469304 | 52083.3 |
| aspartyl-trna synthetase | N180_05930 | Not Available | Positive | 2469602 - 2469868 | 9441.16 |
| hypothetical protein | N180_05935 | Not Available | Positive | 2469930 - 2470310 | 14573.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

