Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_05820 | Not Available | Positive | 2447444 - 2447626 | 6754.31 |
| hypothetical protein | N180_05825 | Not Available | Positive | 2447686 - 2448246 | 20388.7 |
| hypothetical protein | N180_05830 | Not Available | Negative | 2448303 - 2448809 | 19401.9 |
| rna polymerase sigma factor | N180_05835 | Not Available | Negative | 2448806 - 2449390 | 22300.7 |
| hypothetical protein | N180_05840 | Not Available | Positive | 2449655 - 2449999 | 12738.1 |
| esterase | N180_05845 | Not Available | Negative | 2450029 - 2450454 | 15459.7 |
| hypothetical protein | N180_05850 | Not Available | Negative | 2450451 - 2450954 | 19290.1 |
| histidine kinase | N180_05855 | Not Available | Negative | 2450935 - 2452149 | 46703.2 |
| glutamyl-trna synthetase | N180_05860 | Not Available | Positive | 2452238 - 2453746 | 56557.7 |
| metalloprotease | N180_05865 | Not Available | Positive | 2453863 - 2454708 | 30552.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

