Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_05765 | Not Available | Positive | 2434411 - 2434983 | 21256.3 |
| dioxygenase | N180_05770 | Not Available | Positive | 2435068 - 2435895 | 30249.7 |
| peptidase s9 | N180_05775 | Not Available | Positive | 2435976 - 2438321 | 88286.5 |
| alkyl hydroperoxide reductase | N180_05785 | Not Available | Positive | 2438463 - 2439008 | 20492.2 |
| alkylhydroperoxidase | N180_05790 | Not Available | Positive | 2439082 - 2439666 | 21437.7 |
| phosphoenolpyruvate carboxylase | N180_05795 | Not Available | Negative | 2439803 - 2442388 | 97914.6 |
| major facilitator transporter | N180_05800 | Not Available | Negative | 2442674 - 2444221 | 56167.5 |
| secretion protein hlyd | N180_05805 | Not Available | Negative | 2444227 - 2445291 | 38723.0 |
| transporter | N180_05810 | Not Available | Negative | 2445312 - 2446628 | 48735.5 |
| transcriptional regulator | N180_05815 | Not Available | Negative | 2446625 - 2447245 | 23524.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

