Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-3-o-(3-hydroxymyristoyl) glucosamine n-acyltransferase | N180_05705 | Not Available | Positive | 2424920 - 2425966 | 37353.4 |
| acyl-acp--udp-n- acetylglucosamine o-acyltransferase | N180_05715 | Not Available | Positive | 2427401 - 2428186 | 28424.2 |
| abc transporter atp-binding protein | N180_05720 | Not Available | Positive | 2428189 - 2428806 | 22906.3 |
| 5-formyltetrahydrofolate cyclo-ligase | N180_05730 | Not Available | Positive | 2429624 - 2430187 | 21866.5 |
| exodeoxyribonuclease iii | N180_05735 | Not Available | Negative | 2430208 - 2430984 | 29720.5 |
| peptidylprolyl isomerase | N180_05740 | Not Available | Negative | 2430998 - 2431717 | 26612.2 |
| hypothetical protein | N180_05745 | Not Available | Positive | 2431878 - 2432276 | 14298.7 |
| hypothetical protein | N180_05750 | Not Available | Positive | 2432457 - 2432996 | 19547.6 |
| hypothetical protein | N180_05755 | Not Available | Positive | 2433006 - 2433818 | 30568.0 |
| hypothetical protein | N180_05760 | Not Available | Positive | 2433826 - 2434332 | 18448.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

