Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | N180_05585 | Not Available | Negative | 2396586 - 2397395 | 30360.9 |
| hypothetical protein | N180_05590 | Not Available | Negative | 2397392 - 2397601 | 7427.78 |
| hypothetical protein | N180_05595 | Not Available | Negative | 2397591 - 2398511 | 34963.7 |
| nifr3 family tim-barrel protein | N180_05600 | Not Available | Positive | 2398564 - 2399571 | 38152.2 |
| cobalt transporter | N180_05605 | Not Available | Positive | 2399606 - 2399992 | 14663.2 |
| membrane protein | N180_05610 | Not Available | Negative | 2400002 - 2400697 | 25514.2 |
| dna polymerase v | N180_05615 | Not Available | Positive | 2400832 - 2402154 | 50441.5 |
| quinolinate synthetase | N180_05625 | Not Available | Negative | 2403246 - 2404238 | 36883.6 |
| l-aspartate oxidase | N180_05630 | Not Available | Positive | 2404637 - 2406223 | 58888.4 |
| hypothetical protein | N180_05640 | Not Available | Negative | 2406761 - 2408395 | 61462.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

