Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase i | N180_20420 | Not Available | Negative | 2376871 - 2379459 | 96885.4 |
| glutathione peroxidase | N180_20425 | Not Available | Positive | 2379688 - 2380197 | 19150.2 |
| hypothetical protein | N180_05535 | Not Available | Negative | 2381018 - 2382232 | 43857.3 |
| hypothetical protein | N180_05540 | Not Available | Negative | 2382355 - 2384811 | 92316.3 |
| hypothetical protein | N180_05545 | Not Available | Negative | 2385147 - 2385686 | 21195.3 |
| ngg1p interacting factor 3 protein, nif3 | N180_05555 | Not Available | Negative | 2388275 - 2389372 | 40229.6 |
| membrane protein | N180_05560 | Not Available | Negative | 2389395 - 2389760 | 13960.3 |
| hypothetical protein | N180_05565 | Not Available | Negative | 2389753 - 2390109 | 13167.5 |
| hypothetical protein | N180_05575 | Not Available | Positive | 2393494 - 2393709 | 8409.4 |
| peptidase | N180_05580 | Not Available | Negative | 2393784 - 2396489 | 99609.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

