Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase i | N180_20020 | Not Available | Negative | 2350045 - 2352129 | 78445.5 |
| hypothetical protein | N180_20025 | Not Available | Negative | 2352133 - 2353599 | 55858.1 |
| excisionase | N180_20030 | Not Available | Negative | 2353684 - 2353992 | 12160.8 |
| dna-binding protein | N180_20035 | Not Available | Negative | 2354017 - 2354370 | 13969.8 |
| tetracycline regulation of excision, rtec | N180_20040 | Not Available | Negative | 2354622 - 2355467 | 33001.6 |
| hypothetical protein | N180_20045 | Not Available | Negative | 2355840 - 2356061 | 8213.08 |
| peptidase | N180_20050 | Not Available | Positive | 2356325 - 2358550 | 83113.9 |
| excinuclease abc subunit c | N180_20055 | Not Available | Positive | 2358551 - 2360356 | 69155.8 |
| hypothetical protein | N180_20920 | Not Available | Positive | 2360861 - 2361100 | 9240.25 |
| hypothetical protein | N180_20925 | Not Available | Negative | 2361200 - 2361529 | 12811.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

