Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor grea | N180_13810 | Not Available | Positive | 2328254 - 2328727 | 17109.5 |
| hit family hydrolase | N180_13815 | Not Available | Positive | 2328741 - 2329151 | 15051.4 |
| pyrophosphatase | N180_13820 | Not Available | Negative | 2329252 - 2329578 | 12299.6 |
| d-tyrosyl-trna(tyr) deacylase | N180_13825 | Not Available | Negative | 2329581 - 2330033 | 16507.2 |
| hypothetical protein | N180_13830 | Not Available | Negative | 2330030 - 2330368 | 12891.8 |
| gtpase rsga | N180_13835 | Not Available | Negative | 2330523 - 2331443 | 34473.1 |
| aspartate kinase | N180_13840 | Not Available | Positive | 2331712 - 2334159 | 89273.5 |
| serine kinase | N180_13845 | Not Available | Positive | 2334156 - 2335091 | 33157.3 |
| threonine synthase | N180_13850 | Not Available | Positive | 2335124 - 2336440 | 48796.4 |
| hypothetical protein | N180_13855 | Not Available | Negative | 2336452 - 2336889 | 15953.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

