Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase | N180_13690 | Not Available | Negative | 2303493 - 2303966 | 16975.5 |
| 3-oxoacyl-acp synthase | N180_13695 | Not Available | Negative | 2304036 - 2305025 | 35825.6 |
| phosphate acyltransferase | N180_13700 | Not Available | Negative | 2305039 - 2305977 | 33652.1 |
| hypothetical protein | N180_13705 | Not Available | Negative | 2306292 - 2306813 | 19891.6 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | N180_13710 | Not Available | Negative | 2306933 - 2308012 | 38944.8 |
| collagen-binding protein | N180_13720 | Not Available | Positive | 2308234 - 2311542 | 122149.0 |
| starch-binding protein | N180_13725 | Not Available | Positive | 2311568 - 2313346 | 66813.0 |
| endonuclease | N180_13730 | Not Available | Positive | 2313353 - 2314210 | 32190.2 |
| hypothetical protein | N180_13740 | Not Available | Negative | 2315158 - 2316045 | 31839.6 |
| gntr family transcriptional regulator | N180_13745 | Not Available | Negative | 2316137 - 2317552 | 52781.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

