Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylamine--glycine ligase | N180_15840 | Not Available | Positive | 2285812 - 2287083 | 45457.7 |
| metal abc transporter atpase | N180_19860 | Not Available | Positive | 2287593 - 2289563 | 71331.4 |
| hypothetical protein | N180_19865 | Not Available | Negative | 2289643 - 2290323 | 26545.1 |
| hypothetical protein | N180_19875 | Not Available | Negative | 2290849 - 2291352 | 19063.9 |
| arsr family transcriptional regulator | N180_19880 | Not Available | Positive | 2291497 - 2291877 | 14022.5 |
| hypothetical protein | N180_19885 | Not Available | Positive | 2291874 - 2292476 | 21684.3 |
| hypothetical protein | N180_19890 | Not Available | Positive | 2292939 - 2293529 | 22611.4 |
| hypothetical protein | N180_19895 | Not Available | Positive | 2293556 - 2293831 | 10078.0 |
| hypothetical protein | N180_19905 | Not Available | Positive | 2293991 - 2294452 | 17550.7 |
| crp/fnr family transcriptional regulator | N180_19910 | Not Available | Positive | 2294823 - 2295449 | 24440.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

