Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase | N180_15735 | Not Available | Negative | 2259695 - 2261167 | 55924.5 |
| molybdopterin oxidoreductase | N180_15740 | Not Available | Negative | 2261191 - 2264220 | 110953.0 |
| cytochrome c | N180_15745 | Not Available | Negative | 2264265 - 2265560 | 47941.1 |
| deoxyhypusine synthase | N180_15750 | Not Available | Negative | 2265813 - 2266793 | 36909.2 |
| hypothetical protein | N180_15755 | Not Available | Positive | 2267121 - 2267492 | 14643.9 |
| hypothetical protein | N180_15760 | Not Available | Positive | 2267531 - 2268652 | 42186.1 |
| sam-dependent methyltransferase | N180_15765 | Not Available | Negative | 2268649 - 2269431 | 29973.1 |
| hypothetical protein | N180_15770 | Not Available | Positive | 2269475 - 2270344 | 33656.2 |
| 1,4-beta-xylanase | N180_15775 | Not Available | Negative | 2270341 - 2271270 | 33902.6 |
| hypothetical protein | N180_15780 | Not Available | Negative | 2271281 - 2271685 | 15347.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

