Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| caa(3)-type oxidase | N180_15685 | Not Available | Negative | 2250335 - 2250694 | 13599.2 |
| cytochrome oxidase subunit iii | N180_15690 | Not Available | Negative | 2250719 - 2251426 | 26703.8 |
| cytochrome c oxidase subunit iii | N180_15695 | Not Available | Negative | 2251457 - 2252047 | 22051.1 |
| polyprenyltransferase | N180_15700 | Not Available | Negative | 2252049 - 2252951 | 33722.4 |
| cytochrome oxidase assembly protein | N180_15705 | Not Available | Negative | 2252969 - 2254027 | 39606.3 |
| cytochrome c oxidase | N180_15710 | Not Available | Negative | 2254113 - 2256002 | 70840.2 |
| heme transporter ccmd | N180_15715 | Not Available | Negative | 2256023 - 2257285 | 46565.9 |
| quinol:cytochrome c oxidoreductase | N180_15720 | Not Available | Negative | 2257350 - 2258564 | 45992.3 |
| cytochrome c | N180_15725 | Not Available | Negative | 2258579 - 2259184 | 21881.8 |
| quinol:cytochrome c oxidoreductase | N180_15730 | Not Available | Negative | 2259156 - 2259692 | 19896.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

