Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein | N180_13105 | Not Available | Positive | 2231896 - 2232279 | 14126.1 |
| ribonucleoside-diphosphate reductase | N180_13110 | Not Available | Positive | 2232590 - 2233567 | 37596.8 |
| ribonucleoside-diphosphate reductase | N180_13115 | Not Available | Positive | 2233623 - 2236001 | 89332.6 |
| acyltransferase | N180_13120 | Not Available | Positive | 2236415 - 2237290 | 32665.6 |
| agmatine deiminase | N180_13125 | Not Available | Positive | 2237274 - 2238329 | 39316.4 |
| 3-ketoacyl-acp reductase | N180_13130 | Not Available | Positive | 2238411 - 2239154 | 26291.8 |
| hypothetical protein | N180_13135 | Not Available | Positive | 2239263 - 2239874 | 22368.4 |
| septum formation initiator | N180_13140 | Not Available | Negative | 2239871 - 2240170 | 12128.4 |
| enolase | N180_13145 | Not Available | Negative | 2240357 - 2241649 | 46525.3 |
| abc transporter permease | N180_13150 | Not Available | Negative | 2241760 - 2242851 | 39808.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

