Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate dehydrogenase | N180_13050 | Not Available | Positive | 2218469 - 2219470 | 37467.6 |
| hypothetical protein | N180_13055 | Not Available | Positive | 2219592 - 2219897 | 10989.3 |
| tonb-dependent receptor | N180_13060 | Not Available | Positive | 2220141 - 2222921 | 99917.3 |
| gamma-glutamyltranspeptidase | N180_13065 | Not Available | Positive | 2223081 - 2224778 | 61040.1 |
| dead/deah box helicase | N180_13070 | Not Available | Negative | 2225158 - 2227029 | 68856.4 |
| hypothetical protein | N180_13075 | Not Available | Negative | 2227114 - 2227572 | 16817.2 |
| pseudouridine synthase | N180_13080 | Not Available | Positive | 2227652 - 2228410 | 28206.5 |
| antibiotic abc transporter atp-binding protein | N180_13085 | Not Available | Positive | 2228412 - 2230184 | 66802.9 |
| succinate--coa ligase | N180_13090 | Not Available | Positive | 2230266 - 2231138 | 29900.5 |
| methionine sulfoxide reductase b | N180_13100 | Not Available | Positive | 2231298 - 2231786 | 17785.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

