Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_13000 | Not Available | Positive | 2205028 - 2207115 | 80354.6 |
| cyclophilin | N180_13005 | Not Available | Positive | 2207244 - 2207705 | 16649.7 |
| hypothetical protein | N180_13010 | Not Available | Positive | 2207710 - 2208249 | 19008.0 |
| 50s rrna methyltransferase | N180_13015 | Not Available | Negative | 2208513 - 2208986 | 18170.2 |
| dna mismatch repair protein muts | N180_13020 | Not Available | Positive | 2209088 - 2210917 | 68616.5 |
| beta-galactosidase | N180_13025 | Not Available | Positive | 2211002 - 2212336 | 50105.5 |
| aconitate hydratase | N180_13030 | Not Available | Negative | 2212385 - 2214652 | 81675.3 |
| polysaccharide deacetylase | N180_13035 | Not Available | Negative | 2214938 - 2215555 | 23829.0 |
| transporter | N180_13040 | Not Available | Positive | 2215634 - 2217016 | 50552.3 |
| transporter | N180_13045 | Not Available | Positive | 2217044 - 2218396 | 47876.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

