Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | N180_11480 | Not Available | Positive | 2193370 - 2194752 | 52991.6 |
| nucleotidyltransferase | N180_12955 | Not Available | Negative | 2194787 - 2195686 | 34132.6 |
| peptidase m42 | N180_12960 | Not Available | Negative | 2195948 - 2197063 | 41460.5 |
| porin | N180_12965 | Not Available | Negative | 2197179 - 2198411 | 46053.3 |
| hypothetical protein | N180_12970 | Not Available | Positive | 2198598 - 2198939 | 13110.0 |
| membrane protein | N180_12975 | Not Available | Positive | 2199011 - 2200618 | 57477.0 |
| carbonate dehydratase | N180_12980 | Not Available | Positive | 2200620 - 2201291 | 25084.9 |
| 1-pyrroline-5-carboxylate dehydrogenase | N180_12985 | Not Available | Negative | 2201372 - 2203000 | 59585.8 |
| tetraacyldisaccharide 4'-kinase | N180_12990 | Not Available | Positive | 2203190 - 2204263 | 40686.5 |
| purine nucleoside phosphorylase | N180_12995 | Not Available | Positive | 2204214 - 2205035 | 30213.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

