Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_11375 | Not Available | Positive | 2171690 - 2172022 | 12492.8 |
| osmc family protein | N180_11380 | Not Available | Negative | 2172009 - 2172416 | 14676.7 |
| lipoyl synthase | N180_11385 | Not Available | Positive | 2172575 - 2173453 | 33022.8 |
| rna polymerase sigma-70 factor | N180_11390 | Not Available | Positive | 2173524 - 2174075 | 21044.5 |
| hypothetical protein | N180_11395 | Not Available | Positive | 2174076 - 2174915 | 31038.8 |
| hypothetical protein | N180_11400 | Not Available | Negative | 2174908 - 2176401 | 54016.2 |
| excinuclease abc subunit a | N180_11405 | Not Available | Negative | 2176413 - 2179256 | 105850.0 |
| lipid-binding protein | N180_11410 | Not Available | Positive | 2179591 - 2180235 | 24028.2 |
| hypothetical protein | N180_11415 | Not Available | Positive | 2180352 - 2181248 | 33900.9 |
| hypothetical protein | N180_11420 | Not Available | Positive | 2181365 - 2182459 | 41598.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

