Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-phosphoglucomutase | N180_11270 | Not Available | Negative | 2148217 - 2148885 | 23813.5 |
| alpha-amylase | N180_11275 | Not Available | Negative | 2148914 - 2150770 | 71235.8 |
| hypothetical protein | N180_11280 | Not Available | Negative | 2150853 - 2151890 | 37272.7 |
| membrane protein | N180_11285 | Not Available | Negative | 2151904 - 2153478 | 57395.5 |
| membrane protein | N180_11290 | Not Available | Negative | 2153573 - 2156530 | 107467.0 |
| laci family transcriptional regulator | N180_11295 | Not Available | Negative | 2157002 - 2158012 | 37644.1 |
| polyprenyl synthetase | N180_11305 | Not Available | Negative | 2159644 - 2160615 | 36522.2 |
| hypothetical protein | N180_11310 | Not Available | Negative | 2160690 - 2161670 | 36766.3 |
| beta-lactamase | N180_11315 | Not Available | Negative | 2161663 - 2163084 | 51627.9 |
| 1-alkyl-2-acetylglycerophosphocholine esterase | N180_11320 | Not Available | Negative | 2163214 - 2164230 | 37186.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

