Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_21110 | Not Available | Negative | 2133782 - 2134222 | 17522.5 |
| 50s ribosomal protein l25 | N180_11220 | Not Available | Negative | 2134592 - 2135170 | 21285.2 |
| ribose-phosphate pyrophosphokinase | N180_11225 | Not Available | Negative | 2135250 - 2136191 | 34160.5 |
| Trna-gln | Not Available | Not Available | Positive | 2136261 - 2136334 | Not Available |
| multidrug transporter | N180_11240 | Not Available | Positive | 2136840 - 2139875 | 114629.0 |
| acetyl-coa carboxyl transferase | N180_11245 | Not Available | Negative | 2140011 - 2140964 | 35602.3 |
| carboxypeptidase | N180_11250 | Not Available | Negative | 2141002 - 2142549 | 57759.0 |
| major facilitator transporter | N180_11255 | Not Available | Negative | 2142639 - 2143994 | 49526.2 |
| alpha-amylase | N180_11260 | Not Available | Negative | 2144023 - 2145780 | 65676.3 |
| maltose phosphorylase | N180_11265 | Not Available | Negative | 2145777 - 2148095 | 87690.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

