Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospho-n-acetylmuramoyl-pentapeptide- transferase | N180_11930 | Not Available | Negative | 2122490 - 2123737 | 46448.1 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | N180_11935 | Not Available | Negative | 2123737 - 2125194 | 53217.7 |
| cell division protein | N180_11940 | Not Available | Negative | 2125195 - 2127294 | 76972.8 |
| hypothetical protein | N180_11945 | Not Available | Negative | 2127284 - 2127706 | 16149.8 |
| 16s rrna methyltransferase | N180_11950 | Not Available | Negative | 2127703 - 2128608 | 33840.5 |
| cell division protein mraz | N180_11955 | Not Available | Negative | 2128598 - 2129065 | 17775.3 |
| phosphoglycerate kinase | N180_11960 | Not Available | Negative | 2129246 - 2130439 | 43082.8 |
| glyceraldehyde-3-phosphate dehydrogenase | N180_11965 | Not Available | Negative | 2130650 - 2131651 | 36111.4 |
| hypothetical protein | N180_11975 | Not Available | Positive | 2132122 - 2133369 | 46553.7 |
| hypothetical protein | N180_21105 | Not Available | Positive | 2133468 - 2133798 | 12767.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

