Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthase | N180_11880 | Not Available | Positive | 2110403 - 2111281 | 31389.6 |
| histone h1 | N180_11885 | Not Available | Negative | 2111349 - 2111525 | 6597.93 |
| 8-amino-7-oxononanoate synthase | N180_11890 | Not Available | Negative | 2111790 - 2113034 | 46443.4 |
| cell division protein ftsz | N180_11895 | Not Available | Negative | 2113195 - 2114832 | 59777.6 |
| cell division protein ftsa | N180_11900 | Not Available | Negative | 2114961 - 2116322 | 49392.9 |
| cell division protein ftsq | N180_11905 | Not Available | Negative | 2116374 - 2117465 | 40725.2 |
| udp-n-acetylmuramate--alanine ligase | N180_11910 | Not Available | Negative | 2117458 - 2118813 | 49951.9 |
| udp-diphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | N180_11915 | Not Available | Negative | 2118819 - 2119925 | 39914.0 |
| cell division protein ftsw | N180_11920 | Not Available | Negative | 2119935 - 2121143 | 43845.2 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | N180_11925 | Not Available | Negative | 2121147 - 2122490 | 49414.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

