Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium transporter | N180_14405 | Not Available | Negative | 172075 - 173424 | 49915.4 |
| cation transporter | N180_14410 | Not Available | Negative | 173430 - 174548 | 43476.9 |
| hypothetical protein | N180_14415 | Not Available | Negative | 174552 - 175166 | 24582.4 |
| glycosyl transferase family 2 | N180_14420 | Not Available | Positive | 175269 - 176294 | 38948.9 |
| 3-dehydroquinate dehydratase | N180_14425 | Not Available | Negative | 176269 - 176688 | 15288.2 |
| integrase | N180_14430 | Not Available | Positive | 176732 - 177631 | 33947.2 |
| hypothetical protein | N180_14435 | Not Available | Negative | 177628 - 178470 | 32047.7 |
| riboflavin biosynthesis protein ribd | N180_14440 | Not Available | Positive | 178551 - 179606 | 39232.3 |
| transporter | N180_14445 | Not Available | Positive | 179603 - 180463 | 31293.2 |
| thymidylate synthase | N180_14450 | Not Available | Positive | 180453 - 181067 | 22850.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

