Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase | N180_11770 | Not Available | Negative | 2083197 - 2084192 | 36946.3 |
| homogentisate 1,2-dioxygenase | N180_11775 | Not Available | Positive | 2084581 - 2085747 | 44837.2 |
| 4-hydroxyphenylpyruvate dioxygenase | N180_11780 | Not Available | Positive | 2085781 - 2086908 | 42561.5 |
| ribonuclease | N180_11785 | Not Available | Positive | 2087098 - 2088021 | 35131.7 |
| hypothetical protein | N180_11790 | Not Available | Negative | 2088018 - 2088299 | 10709.9 |
| hypothetical protein | N180_11795 | Not Available | Negative | 2088511 - 2089107 | 21222.6 |
| hypothetical protein | N180_11800 | Not Available | Positive | 2089266 - 2091023 | 66966.9 |
| hypothetical protein | N180_11805 | Not Available | Negative | 2091118 - 2091414 | 11281.4 |
| riboflavin synthase subunit alpha | N180_11810 | Not Available | Negative | 2091541 - 2092134 | 21599.7 |
| n-acetylglucosamine kinase | N180_11815 | Not Available | Positive | 2092668 - 2093534 | 32363.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

