Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_16730 | Not Available | Positive | 2070249 - 2070776 | 20386.5 |
| tonb-dependent receptor | N180_16735 | Not Available | Positive | 2070891 - 2073680 | 103772.0 |
| hypothetical protein | N180_16740 | Not Available | Positive | 2073824 - 2075265 | 49588.5 |
| glycyl-trna synthetease | N180_11735 | Not Available | Positive | 2076022 - 2077509 | 57482.6 |
| allergen v5/tpx-1 family protein | N180_11740 | Not Available | Positive | 2077849 - 2078565 | 27412.7 |
| phenylalanine 4-monooxygenase | N180_11745 | Not Available | Positive | 2078636 - 2079115 | 18478.2 |
| phenylalanine 4-monooxygenase | N180_11750 | Not Available | Positive | 2079201 - 2080985 | 66740.3 |
| short-chain dehydrogenase | N180_11755 | Not Available | Positive | 2080992 - 2081693 | 25115.6 |
| hydrolase | N180_11760 | Not Available | Positive | 2081784 - 2082296 | 18463.4 |
| flavin reductase | N180_11765 | Not Available | Negative | 2082301 - 2083197 | 32931.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

