Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein roda | N180_16665 | Not Available | Negative | 2055907 - 2057172 | 47273.4 |
| membrane protein | N180_16675 | Not Available | Negative | 2059092 - 2059607 | 19772.8 |
| rod shape-determining protein mrec | N180_16680 | Not Available | Negative | 2059597 - 2060436 | 31003.3 |
| rod shape-determining protein mreb | N180_16685 | Not Available | Negative | 2060504 - 2061526 | 36789.0 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase | N180_16690 | Not Available | Negative | 2061612 - 2063138 | 55924.8 |
| phosphoribosylglycinamide formyltransferase | N180_16695 | Not Available | Negative | 2063212 - 2063790 | 21888.4 |
| 30s ribosomal protein s20 | N180_16700 | Not Available | Positive | 2064197 - 2064451 | 9800.21 |
| hypothetical protein | N180_16705 | Not Available | Positive | 2064513 - 2065211 | 25795.3 |
| phenylalanyl-trna synthetase subunit beta | N180_16715 | Not Available | Positive | 2067743 - 2068033 | 10782.2 |
| cell division protein zapa | N180_16720 | Not Available | Positive | 2068066 - 2068356 | 11160.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

