Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_20720 | Not Available | Positive | 2036278 - 2036940 | 25640.4 |
| hypothetical protein | N180_20725 | Not Available | Positive | 2037016 - 2037708 | 27073.6 |
| plasmid transfer protein | N180_20730 | Not Available | Positive | 2037720 - 2038886 | 42455.5 |
| conjugal transfer protein trak | N180_20735 | Not Available | Positive | 2038912 - 2039526 | 23601.5 |
| abc transporter atpase | N180_16575 | Not Available | Negative | 2040468 - 2040947 | 18676.8 |
| hypothetical protein | N180_16580 | Not Available | Positive | 2041084 - 2041557 | 18051.8 |
| metallo-beta-lactamase | N180_16585 | Not Available | Negative | 2041484 - 2042335 | 31503.6 |
| cob--com heterodisulfide reductase | N180_16590 | Not Available | Negative | 2042325 - 2043125 | 29264.4 |
| fe-s oxidoreductase | N180_16595 | Not Available | Negative | 2043150 - 2044445 | 48193.1 |
| Trna-phe | Not Available | Not Available | Positive | 2044657 - 2044729 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

