Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s9 | N180_06830 | Not Available | Positive | 2022259 - 2024433 | 82041.7 |
| mrna 3'-end processing factor | N180_06835 | Not Available | Positive | 2024750 - 2025772 | 37806.2 |
| atp-dependent dna ligase | N180_06840 | Not Available | Positive | 2025774 - 2027366 | 60788.8 |
| dead/deah box helicase | N180_06845 | Not Available | Positive | 2027363 - 2029846 | 93358.8 |
| phosphoesterase | N180_06850 | Not Available | Positive | 2029849 - 2030484 | 24418.6 |
| nudix hydrolase | N180_06855 | Not Available | Negative | 2030485 - 2030934 | 17066.2 |
| aspartate aminotransferase | N180_06865 | Not Available | Positive | 2032020 - 2033213 | 43617.0 |
| hypothetical protein | N180_20705 | Not Available | Positive | 2033229 - 2034931 | 65808.6 |
| hypothetical protein | N180_20710 | Not Available | Positive | 2034962 - 2035624 | 24705.9 |
| hypothetical protein | N180_20715 | Not Available | Positive | 2035621 - 2036271 | 24533.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

