Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogen regulatory iia protein | N180_06625 | Not Available | Positive | 1993566 - 1993850 | 11180.7 |
| conjugal transfer protein tram | N180_06630 | Not Available | Positive | 1993837 - 1995177 | 49080.0 |
| conjugal transfer protein trbn | N180_06635 | Not Available | Positive | 1995265 - 1996158 | 34046.1 |
| conjugal transfer protein trao | N180_06640 | Not Available | Positive | 1996179 - 1996739 | 20870.1 |
| conjugal transfer protein traq | N180_06645 | Not Available | Positive | 1996751 - 1997200 | 17420.6 |
| molybdenum abc transporter permease | N180_06650 | Not Available | Positive | 1997302 - 1997580 | 10716.3 |
| arac family transcriptional regulator | N180_06655 | Not Available | Positive | 1997619 - 1998356 | 27890.0 |
| hypothetical protein | N180_06660 | Not Available | Positive | 1998422 - 1998964 | 20235.1 |
| dna-binding protein | N180_06665 | Not Available | Positive | 1999302 - 1999613 | 12034.5 |
| dna-binding protein | N180_06670 | Not Available | Positive | 1999594 - 1999893 | 11664.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

