Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trag | N180_06525 | Not Available | Negative | 1975018 - 1977018 | 75996.7 |
| iron (metal) dependent repressor, dtxr family protein | N180_06530 | Not Available | Negative | 1977140 - 1977808 | 25228.6 |
| hypothetical protein | N180_06535 | Not Available | Positive | 1978006 - 1979205 | 43375.5 |
| hypothetical protein | N180_06540 | Not Available | Positive | 1979207 - 1979653 | 16224.6 |
| hypothetical protein | N180_06545 | Not Available | Positive | 1979646 - 1980887 | 46831.8 |
| relaxase | N180_06550 | Not Available | Negative | 1980927 - 1982213 | 48430.1 |
| hypothetical protein | N180_06555 | Not Available | Negative | 1982216 - 1982653 | 16849.6 |
| conjugal transfer protein traa | N180_06560 | Not Available | Positive | 1983338 - 1984105 | 29206.5 |
| conjugal transfer protein trab | N180_06565 | Not Available | Positive | 1984118 - 1984528 | 16171.8 |
| hypothetical protein | N180_06570 | Not Available | Positive | 1984528 - 1984833 | 11802.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

