Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_06365 | Not Available | Negative | 1939266 - 1940165 | 33987.9 |
| hypothetical protein | N180_06370 | Not Available | Negative | 1940342 - 1940818 | 18733.0 |
| tetracycline regulation of excision, rtec | N180_06375 | Not Available | Positive | 1941141 - 1941986 | 33178.9 |
| dna-binding protein | N180_06380 | Not Available | Positive | 1942238 - 1942591 | 13848.6 |
| excisionase | N180_06385 | Not Available | Positive | 1942618 - 1942926 | 12155.8 |
| hypothetical protein | N180_06390 | Not Available | Positive | 1943012 - 1944481 | 55732.8 |
| dna topoisomerase i | N180_06395 | Not Available | Positive | 1944488 - 1946563 | 77692.9 |
| hypothetical protein | N180_06400 | Not Available | Positive | 1946682 - 1947470 | 30026.4 |
| hypothetical protein | N180_06405 | Not Available | Positive | 1947472 - 1948392 | 35361.1 |
| hypothetical protein | N180_06410 | Not Available | Positive | 1948587 - 1949531 | 37342.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

