Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna amidotransferase | N180_06250 | Not Available | Negative | 1908340 - 1909803 | 53910.5 |
| hypothetical protein | N180_06255 | Not Available | Positive | 1909953 - 1910477 | 20870.5 |
| hypothetical protein | N180_06260 | Not Available | Positive | 1910598 - 1911020 | 15825.2 |
| metal abc transporter atpase | N180_06265 | Not Available | Positive | 1911084 - 1913054 | 70765.5 |
| alanyl-trna synthetase | N180_06270 | Not Available | Negative | 1913107 - 1915806 | 101729.0 |
| merr family transcriptional regulator | N180_06275 | Not Available | Positive | 1915923 - 1916258 | 13072.8 |
| hypothetical protein | N180_06280 | Not Available | Positive | 1916341 - 1918392 | 77593.5 |
| hypothetical protein | N180_06285 | Not Available | Positive | 1918394 - 1920163 | 67412.4 |
| secretion protein hyld | N180_06295 | Not Available | Positive | 1925343 - 1926686 | 48158.1 |
| hypothetical protein | N180_06300 | Not Available | Positive | 1926707 - 1927288 | 22399.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

