Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m28 | N180_17840 | Not Available | Negative | 1894848 - 1896497 | 60059.1 |
| amidohydrolase | N180_17845 | Not Available | Negative | 1896561 - 1897385 | 30601.4 |
| fucose permease | N180_17850 | Not Available | Negative | 1897393 - 1898637 | 44847.1 |
| hypothetical protein | N180_17855 | Not Available | Negative | 1898773 - 1900062 | 49329.6 |
| gcn5 family acetyltransferase | N180_17860 | Not Available | Negative | 1900214 - 1900813 | 22845.3 |
| membrane protein | N180_17865 | Not Available | Negative | 1900850 - 1903387 | 96615.7 |
| chloride channel protein | N180_06230 | Not Available | Negative | 1903726 - 1905463 | 63489.7 |
| pseudouridylate synthase | N180_06235 | Not Available | Negative | 1905474 - 1906196 | 27565.4 |
| arsr family transcriptional regulator | N180_06240 | Not Available | Negative | 1906268 - 1906957 | 26029.7 |
| thioredoxin | N180_06245 | Not Available | Negative | 1907062 - 1908192 | 42430.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

