Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 1874971 - 1875043 | Not Available |
| transposase | N180_10265 | Not Available | Positive | 1875208 - 1875573 | 14187.0 |
| hypothetical protein | N180_10275 | Not Available | Positive | 1875905 - 1876231 | 12620.1 |
| hypothetical protein | N180_10280 | Not Available | Positive | 1876931 - 1877140 | 7981.59 |
| hypothetical protein | N180_10290 | Not Available | Positive | 1877646 - 1877951 | 11367.0 |
| fatty acid desaturase | N180_17760 | Not Available | Negative | 1878540 - 1879268 | 29366.7 |
| phosphoheptose isomerase | N180_17765 | Not Available | Negative | 1879433 - 1879930 | 18804.9 |
| 3-oxoacyl-acp synthase | N180_17770 | Not Available | Positive | 1880468 - 1881712 | 43774.4 |
| carbohydrate kinase | N180_17775 | Not Available | Positive | 1881970 - 1883442 | 53828.1 |
| xylose isomerase | N180_17780 | Not Available | Positive | 1883476 - 1884807 | 49666.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

